yes.
unfortunately, and one of my main gripes pre 3.3 was that our mapping as a mod dir was shit. we have textures that noone ever uses. thats one of the reasons we totally redid the maps for 3.5
mapping for 3.5 will be much simpler. you will need another directory. ok, nbd, that will ONLY have the pak35 in it and no other maps. it'll be simple, it'll work. after working with everyone's maps and more since 3.3, i had to figure out a way to make it easy and sane for myself and others will benifit from this.